CDS

Accession Number TCMCG057C47260
gbkey CDS
Protein Id XP_018457285.1
Location complement(join(1727070..1727147,1727244..1727334,1727597..1727670,1727745..1727792,1727875..1728315,1728401..1728691,1728922..1729086,1729191..1729436,1735011..1735132,1735256..1735398,1735548..1736028,1736138..1736231,1736445..1736536,1736610..1736754,1736918..1737025,1737299..1737420,1737520..1737562,1737635..1737817))
Gene LOC108828183
GeneID 108828183
Organism Raphanus sativus

Protein

Length 988aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018601783.1
Definition PREDICTED: DNA topoisomerase 2-binding protein 1 isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category L
Description twin BRCT domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10728        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03440        [VIEW IN KEGG]
map03440        [VIEW IN KEGG]
GOs GO:0000075        [VIEW IN EMBL-EBI]
GO:0000076        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0001932        [VIEW IN EMBL-EBI]
GO:0001934        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006270        [VIEW IN EMBL-EBI]
GO:0006275        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010562        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019220        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019900        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030174        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031401        [VIEW IN EMBL-EBI]
GO:0031570        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033135        [VIEW IN EMBL-EBI]
GO:0033138        [VIEW IN EMBL-EBI]
GO:0033260        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0033674        [VIEW IN EMBL-EBI]
GO:0034502        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0035561        [VIEW IN EMBL-EBI]
GO:0035563        [VIEW IN EMBL-EBI]
GO:0042325        [VIEW IN EMBL-EBI]
GO:0042327        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043549        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044786        [VIEW IN EMBL-EBI]
GO:0045786        [VIEW IN EMBL-EBI]
GO:0045859        [VIEW IN EMBL-EBI]
GO:0045860        [VIEW IN EMBL-EBI]
GO:0045937        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051098        [VIEW IN EMBL-EBI]
GO:0051099        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051174        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051338        [VIEW IN EMBL-EBI]
GO:0051347        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065004        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071163        [VIEW IN EMBL-EBI]
GO:0071165        [VIEW IN EMBL-EBI]
GO:0071168        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090329        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAGACGGCGACGCAACTGTTCAAAGGGGCAAACGTATTCATGTCTCGTAACCTGGTACCCCCTGAAGTGTTCGACACACTCCTCGACACCTTCAAGCTAAACGGCGCCGAAATCTTCCTCTGCTGCGATCCCTCCCGCAACGGTCCCTCCGACTTCCACGTCATCGCTTCTCCCCTTCATGAGAAATTCGAGGATCTTAAAGCTAAGGGTTGTAACTTAATAGGTCCGCAATGTGTGCTCTCTTGTGCGAAAGAGGGTAGAGCTCTGCCACAAGGGGGATTCACTTGTTGTTTAGCCATGGATGGTCTTAAGGTTCTTGCTTCTGGTTTTCAGATAGATGAGAAGGTCAAGATCGAGAAGCTAGTTACGTCCATGGGGGGAGTTTTGGTTTCCAGAACTTCTTCAGATGTCAACTTCGTCATTGTTAAGAACGTCTTGGCTGCTAAGTACAAGTGGGCCCTGTATGTTCAGAAGAAGCCAGTTGTTGCACTGAGTTGGTTACATCAGTGTTGGAATGAGCACCGTGTGGTTCCGCAGGAACCATATAAGATTCCTCCTTTTTCTGGATTGAGGATCTGTGTCACAAAAATTCCAGCAGATCAGCGTAAGGGAATGGAGAAGCTAATTTCAGAAAATGGAGGGAAGTACTCTGCGGAGCTAACAAAGGCGTGTACACATCTGATCGCTGATGCTGCCGAAGGTGACAAATACAAAGTTGCTCGGAAATGGGGTCACATTCAAATTGTTACGCGGAAATGGTTTGAGCAGTCCATTGCTAGAAAAGTTTGTCTCAATGAAGAGTTGTATCCTGTTCTGGGTTCCGTATCCTTGAGTAGAGGGGTGAGAGATTTACGGAACCATGATAATCAAGAAAAATTTCCTGAATGTCCAGTGTCACTTTCGCATTCGACTGCGGTTGCGGAAGACTCATATGCTTCTTATGCTCAGTCCAGAGAGTCAGATATAGAACCATGTGCCTCACAAAATCTTCTTTCCAAATCTATGAATCCCAGTAGCCATGTTAAAGAACCAAGTAAAGACCCAACTACAGAGCCGCAAGAGCAAAATATAAGTGGTTGTACCGCCATGGATTTAGAATCTGAAGACAATGACCTGTACTTATCAGATTGTAAAATTTTCTTGCTTGGTTTTGAAGCCTCTGAAATGCGTAGACTTGTTAAGTTGGTCCGAAGAGGTGGTGGATCACGGTATATGATTCTTAGCGAAAGAATGACACATATTGTTGTTGGAACTCCTTCAGAGAGTGAGAAAAAGGAAGCGAGGAGTGTTGCAGCTTCTGGTGTCATTCAAGTAGTTACCCCCAGTTGGCTTGAAGATTGTGATCGTGAGAAAAAAGAAATTCCCATTCATAAAATATATACTGCTCACAGTTTGATTCTTCCAAGAGATTCTGCATGCTTGACCAAGGGATCTCGTGAAGGAATGCCAGGTATGGAAAAGGGTAAAATAACTTTTCCTCAGACCATGGCATATGATTCCCCTTCGAGGAGTATCAATGTTCCAGATGAGGCCGCAACTTTGCGGGGAAAGAATAAAGAAACAGTGCTGGACTTTGGCAGGAAAGATGAGATTCACGTCGAAAGAAAACCAGTACCACCGAAGCAAAAGGAAACATTTAATTCCCTTGTAACTAATAAAAGCAAAGAACAACAGAAAGTTCAATGCGAATCCAGTGGCCAGAGCAAGCAAGAAAGAAAGTCATCAGTATTTAAGGGGAAGATATTTTGTTTCTCACATTCGTTTCCTGAAGATAGGCGACCCGAAATCGTGGAATGGGTGAATCAAGGAGGGGGAGAGGTGGTAAATGATCCCTTTATAAAGAACACACATTTTACTATTGAATGCCATGGTATGTTCCGGAGTGCTGGGGGTACCCAAACCATTTATGTCTCGAGTCACTGGGTTCGATCTTGTTTAGAGGATGGTTTGTTACTTAACGTTAGTAGTCATATCCTCTATTCGCCTCTTCCCTGCCAGGCTCCTTTGCCTGGATTTGAAAGCCTTCGCTTTTGTGTTTCCCATTATGAAGGGAAGGATAGATTACTCCTGAGAAATTTGTGTGTCGTTCTCGGAGCAAAATTTGTGGAAAAACAAACCAAGAAAGTGACTCACTTGCTATGCAAGTTTGCTCACGGACCTAAGTATGACGCAGCTTCCAAGTGGGGAATAGTTCCCGTGACATCTGACTGGCTCTATGAATGTGTTAGACAGAATCAAGTTGTTTGTCCAGATAACTATCATCCAAAGGAAATGAACACTCAAGACCGGGAAGCAGGGATTGGCTTGGCAACTCAATTTCATACACAGTCTGTGCCAGTGGCCTCAAGGGACACTGATTCTCTGCTTGTAAGTCACTCTGAAGATAGGGAAAAATCTCAAAATTTTGCTGGCAAAAATGGCTGCGAGAAAAGTGAGGTAAACAACAGACTTGGAGAAACTGGAAGGGAACAGAGTTTTCCGTCTAAGAAGCCAAAACTTTTTAGAGATGGTCAAGAGCGTGATGCGTTTCCTATGGATGAACATCCAAGTAATTTTGCTCGCCCTTTAAAGGATGGAGATGGTATTGGTTTTGGAAACGACGTAGTAGCAAGTGGTGGCGAAGTTCCAGATGTGGCTGATACGATTGAGGATCTGTTGGAGCAGACAAGTAAAATTCAAGATCAGAACTCTCCTGGGAGTGGGAGGATTTCAGAGAAAACTCTTTTTCCAAGTAGTGAACAATACAACAGCGGGAATCATTCTGTGACTGGCCTGTCTAGACACTGGATAAACAGGGTCCAGGAGAATGACGATGGATGCAAGCCTCCAGGAGATGTACCTACAGGCACTTACGGAAACTTTAGTGAGACGCAGACAGAGTCGCAGGTTGTTGGCTACGAGGAAGATCTTTCAGGAAGGCAGATGCTTATCGATAGAGTAAGAACACGAAGCAGCTTAACATAA
Protein:  
MKTATQLFKGANVFMSRNLVPPEVFDTLLDTFKLNGAEIFLCCDPSRNGPSDFHVIASPLHEKFEDLKAKGCNLIGPQCVLSCAKEGRALPQGGFTCCLAMDGLKVLASGFQIDEKVKIEKLVTSMGGVLVSRTSSDVNFVIVKNVLAAKYKWALYVQKKPVVALSWLHQCWNEHRVVPQEPYKIPPFSGLRICVTKIPADQRKGMEKLISENGGKYSAELTKACTHLIADAAEGDKYKVARKWGHIQIVTRKWFEQSIARKVCLNEELYPVLGSVSLSRGVRDLRNHDNQEKFPECPVSLSHSTAVAEDSYASYAQSRESDIEPCASQNLLSKSMNPSSHVKEPSKDPTTEPQEQNISGCTAMDLESEDNDLYLSDCKIFLLGFEASEMRRLVKLVRRGGGSRYMILSERMTHIVVGTPSESEKKEARSVAASGVIQVVTPSWLEDCDREKKEIPIHKIYTAHSLILPRDSACLTKGSREGMPGMEKGKITFPQTMAYDSPSRSINVPDEAATLRGKNKETVLDFGRKDEIHVERKPVPPKQKETFNSLVTNKSKEQQKVQCESSGQSKQERKSSVFKGKIFCFSHSFPEDRRPEIVEWVNQGGGEVVNDPFIKNTHFTIECHGMFRSAGGTQTIYVSSHWVRSCLEDGLLLNVSSHILYSPLPCQAPLPGFESLRFCVSHYEGKDRLLLRNLCVVLGAKFVEKQTKKVTHLLCKFAHGPKYDAASKWGIVPVTSDWLYECVRQNQVVCPDNYHPKEMNTQDREAGIGLATQFHTQSVPVASRDTDSLLVSHSEDREKSQNFAGKNGCEKSEVNNRLGETGREQSFPSKKPKLFRDGQERDAFPMDEHPSNFARPLKDGDGIGFGNDVVASGGEVPDVADTIEDLLEQTSKIQDQNSPGSGRISEKTLFPSSEQYNSGNHSVTGLSRHWINRVQENDDGCKPPGDVPTGTYGNFSETQTESQVVGYEEDLSGRQMLIDRVRTRSSLT